{"id":99,"date":"2023-11-13T23:21:23","date_gmt":"2023-11-13T23:21:23","guid":{"rendered":"https:\/\/labs.bio.cmu.edu\/bruchez-lab\/?page_id=99"},"modified":"2023-11-14T03:21:38","modified_gmt":"2023-11-14T03:21:38","slug":"publications","status":"publish","type":"page","link":"https:\/\/labs.bio.cmu.edu\/bruchez-lab\/publications\/","title":{"rendered":"Publications"},"content":{"rendered":"<p><div class=\"et_d4_element et_pb_section et_pb_section_0 et_pb_with_background  et_pb_css_mix_blend_mode et_section_regular et_block_section\" >\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t<div class=\"et_d4_element et_pb_row et_pb_row_0  et_pb_css_mix_blend_mode et_block_row\">\n\t\t\t\t<div class=\"et_d4_element et_pb_column_4_4 et_pb_column et_pb_column_0  et_pb_css_mix_blend_mode et-last-child et_block_column\">\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t<div class=\"et_pb_module et_d4_element et_pb_text et_pb_text_0  et_pb_text_align_left et_pb_bg_layout_light\">\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t<div class=\"et_pb_text_inner\"><h1>Publications<\/h1><\/div>\n\t\t\t<\/div>\n\t\t\t<\/div>\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t<\/div>\n\t\t\t\t\n\t\t\t\t\n\t\t\t<\/div><div class=\"et_d4_element et_pb_section et_pb_section_1  et_pb_css_mix_blend_mode et_section_regular et_block_section\" >\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t<div class=\"et_d4_element et_pb_row et_pb_row_1  et_pb_css_mix_blend_mode et_block_row\">\n\t\t\t\t<div class=\"et_d4_element et_pb_column_1_4 et_pb_column et_pb_column_1  et_pb_css_mix_blend_mode et_block_column\">\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t<div class=\"et_pb_button_module_wrapper et_pb_button_0_wrapper et_pb_button_alignment_center et_pb_module \">\n\t\t\t\t<a class=\"et_pb_button et_d4_element et_pb_button_0 et_pb_bg_layout_light et_block_module\" href=\"https:\/\/scholar.google.com\/citations?user=8SIqR9kAAAAJ&#038;hl=en\" target=\"_blank\" data-icon=\"E\">Google Scholar<\/a>\n\t\t\t<\/div><div class=\"et_pb_button_module_wrapper et_pb_button_1_wrapper et_pb_button_alignment_center et_pb_module \">\n\t\t\t\t<a class=\"et_pb_button et_d4_element et_pb_button_1 et_pb_bg_layout_light et_block_module\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/myncbi\/browse\/collection\/41140989\/?sort=date&#038;direction=descending\" target=\"_blank\" data-icon=\"E\">My NCBI List<\/a>\n\t\t\t<\/div><div class=\"et_pb_button_module_wrapper et_pb_button_2_wrapper et_pb_button_alignment_center et_pb_module \">\n\t\t\t\t<a class=\"et_pb_button et_d4_element et_pb_button_2 et_pb_bg_layout_light et_block_module\" href=\"http:\/\/orcid.org\/0000-0002-7370-4848\" target=\"_blank\" data-icon=\"E\">ORCID<\/a>\n\t\t\t<\/div><div class=\"et_pb_button_module_wrapper et_pb_button_3_wrapper et_pb_button_alignment_center et_pb_module \">\n\t\t\t\t<a class=\"et_pb_button et_d4_element et_pb_button_3 et_pb_bg_layout_light et_block_module\" href=\"http:\/\/www.researcherid.com\/rid\/C-2271-2009\" target=\"_blank\" data-icon=\"E\">ResearcherID<\/a>\n\t\t\t<\/div><div class=\"et_pb_button_module_wrapper et_pb_button_4_wrapper et_pb_button_alignment_center et_pb_module \">\n\t\t\t\t<a class=\"et_pb_button et_d4_element et_pb_button_4 et_pb_bg_layout_light et_block_module\" href=\"https:\/\/www.researchgate.net\/profile\/Marcel_Bruchez\" target=\"_blank\" data-icon=\"E\">ResearchGate<\/a>\n\t\t\t<\/div>\n\t\t\t<\/div><div class=\"et_d4_element et_pb_column_3_4 et_pb_column et_pb_column_2  et_pb_css_mix_blend_mode et-last-child et_block_column\">\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t<div class=\"et_pb_module et_d4_element et_pb_text et_pb_text_1  et_pb_text_align_left et_pb_bg_layout_light\">\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t<div class=\"et_pb_text_inner\"><h3>2018<\/h3>\n<ul>\n<li><strong>Ackerman, DS, Altun, B, Kolodieznyi, D, Bruchez, MP, Tsourkas, A, Jarvik, JW.<\/strong> Antibody-Linked Fluorogen-Activating Proteins for Antigen Detection and Cell Ablation. Bioconjug Chem. 2019; 30 (1):63-69. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/30543409\" target=\"_blank\" rel=\"noopener\">PMID:30543409<\/a>.<\/li>\n<li><strong>Shelke, SA, Shao, Y, Laski, A, Koirala, D, Weissman, BP, Fuller, JR, Tan, X, Constantin, TP, Waggoner, AS, Bruchez, MP, Armitage, BA, Piccirilli, JA.<\/strong> Structural basis for activation of fluorogenic dyes by an RNA aptamer lacking a G-quadruplex motif. Nat Commun. 2018; 9 (1):4542. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/30382099\" target=\"_blank\" rel=\"noopener\">PMID:30382099<\/a>.<\/li>\n<li><strong>Tan, X, Bruchez, MP, Armitage, BA<\/strong>. Closing the Loop: Constraining TAT Peptide by \u03b3PNA Hairpin for Enhanced Cellular Delivery of Biomolecules. Bioconjug Chem. 2018; 29 (9):2892-2898. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/30130094\" target=\"_blank\" rel=\"noopener\">PMID:30130094<\/a>.<\/li>\n<li><strong>Zeng, G, Wang, Y, Bruchez, MP, Liang, FS<\/strong>. Self-Reporting Chemically Induced Protein Proximity System Based on a Malachite Green Derivative and the L5** Fluorogen Activating Protein. Bioconjug Chem. 2018; 29 (9):3010-3015. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/30016083\" target=\"_blank\" rel=\"noopener\">PMID:30016083<\/a>.<\/li>\n<li><strong>Hager, NA, Krasowski, CJ, Mackie, TD, Kolb, AR, Needham, PG, Augustine, AA, Dempsey, A, Szent-Gyorgyi, C, Bruchez, MP, Bain, DJ, Kwiatkowski, AV, O\u2019Donnell, AF, Brodsky, JL<\/strong>. Select \u03b1-arrestins control cell-surface abundance of the mammalian Kir2.1 potassium channel in a yeast model. J Biol Chem. 2018; 293 (28):11006-11021. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/29784874\" target=\"_blank\" rel=\"noopener\">PMID:29784874<\/a>.<\/li>\n<li><strong>Lin, Y, Schmidt, BF, Bruchez, MP, McManus, CJ<\/strong>. Structural analyses of NEAT1 lncRNAs suggest long-range RNA interactions that may contribute to paraspeckle architecture. Nucleic Acids Res. 2018; 46 (7):3742-3752. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/29394378\" target=\"_blank\" rel=\"noopener\">PMID:29394378<\/a>.<\/li>\n<li><strong>Bruchez, MP<\/strong>. Through, rather than across. Nat Mater. 2018; 17 (2):112-113. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/31745265\" target=\"_blank\" rel=\"noopener\">PMID:31745265<\/a>.<\/li>\n<li><strong>Perkins, LA, Fisher, GW, Naganbabu, M, Schmidt, BF, Mun, F, Bruchez, MP<\/strong>. High-Content Surface and Total Expression siRNA Kinase Library Screen with VX-809 Treatment Reveals Kinase Targets that Enhance F508del-CFTR Rescue. Mol Pharm. 2018; 15 (3):759-767. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/29384380\" target=\"_blank\" rel=\"noopener\">PMID:29384380<\/a>.<\/li>\n<li><strong>Bruchez, MP<\/strong>. DNA nanostructures: Through, rather than across. Nat Mater. 2018; 17 (2):112-113. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/29358770\" target=\"_blank\" rel=\"noopener\">PMID:29358770<\/a>.<\/li>\n<li><strong>Perkins, LA, Yan, Q, Schmidt, BF, Kolodieznyi, D, Saurabh, S, Larsen, MB, Watkins, SC, Kremer, L, Bruchez, MP<\/strong>. Genetically Targeted Ratiometric and Activated pH Indicator Complexes (TRApHIC) for Receptor Trafficking. Biochemistry. 2018; 57 (5):861-871. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/29283245\" target=\"_blank\" rel=\"noopener\">PMID:29283245<\/a>.<\/li>\n<\/ul>\n<h3>2017<\/h3>\n<ul>\n<li><strong>Larsen, MB, Perez Verdaguer, M, Schmidt, BF, Bruchez, MP, Watkins, SC, Sorkin, A<\/strong>. Generation of endogenous pH-sensitive EGF receptor and its application in high-throughput screening for proteins involved in clathrin-mediated endocytosis. Elife. 2019; 8 :. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/31066673\" target=\"_blank\" rel=\"noopener\">PMID:31066673<\/a>.<\/li>\n<li><strong>Pratt, CP, Kuljis, DA, Homanics, GE, He, J, Kolodieznyi, D, Dudem, S, Hollywood, MA, Barth, AL, Bruchez, MP<\/strong>. Tagging of Endogenous BK Channels with a Fluorogen-Activating Peptide Reveals \u03b24-Mediated Control of Channel Clustering in Cerebellum. Front Cell Neurosci. 2017; 11 :337. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/29163049\" target=\"_blank\" rel=\"noopener\">PMID:29163049<\/a>.<\/li>\n<li><strong>Lorenz-Guertin, JM, Wilcox, MR, Zhang, M, Larsen, MB, Pilli, J, Schmidt, BF, Bruchez, MP, Johnson, JW, Waggoner, AS, Watkins, SC, Jacob, TC<\/strong>. A versatile optical tool for studying synaptic GABAA receptor trafficking. J Cell Sci. 2017; 130 (22):3933-3945. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/29025969\" target=\"_blank\" rel=\"noopener\">PMID:29025969<\/a>.<\/li>\n<li><strong>Tan, X, Constantin, TP, Sloane, KL, Waggoner, AS, Bruchez, MP, Armitage, BA<\/strong>. Fluoromodules Consisting of a Promiscuous RNA Aptamer and Red or Blue Fluorogenic Cyanine Dyes: Selection, Characterization, and Bioimaging. J Am Chem Soc. 2017; 139 (26):9001-9009. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/28644615\" target=\"_blank\" rel=\"noopener\">PMID:28644615<\/a>.<\/li>\n<li><strong>Shiwarski, DJ, Darr, M, Telmer, CA, Bruchez, MP, Puthenveedu, MA<\/strong>. PI3K class II \u03b1 regulates \u03b4-opioid receptor export from the trans-Golgi network. Mol Biol Cell. 2017; 28 (16):2202-2219. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/28566554\" target=\"_blank\" rel=\"noopener\">PMID:28566554<\/a>.<\/li>\n<li><strong>Wang, Y, Ballou, B, Schmidt, BF, Andreko, S, St Croix, CM, Watkins, SC, Bruchez, MP<\/strong>. Affibody-targeted fluorogen activating protein for in vivo tumor imaging. Chem Commun (Camb). 2017; 53 (12):2001-2004. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/28120951\" target=\"_blank\" rel=\"noopener\">PMID:28120951<\/a>.<\/li>\n<\/ul>\n<h3>2016<\/h3>\n<ul>\n<li><strong>Naganbabu, M, Perkins, LA, Wang, Y, Kurish, J, Schmidt, BF, Bruchez, MP<\/strong>. Multiexcitation Fluorogenic Labeling of Surface, Intracellular, and Total Protein Pools in Living Cells. Bioconjug Chem. 2016; 27 (6):1525-31. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/27159569\" target=\"_blank\" rel=\"noopener\">PMID:27159569<\/a>.<\/li>\n<li><strong>Oyaghire, SN, Cherubim, CJ, Telmer, CA, Martinez, JA, Bruchez, MP, Armitage, BA<\/strong>. RNA G-Quadruplex Invasion and Translation Inhibition by Antisense \u03b3-Peptide Nucleic Acid Oligomers. Biochemistry. 2016; 55 (13):1977-88. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/26959335\" target=\"_blank\" rel=\"noopener\">PMID:26959335<\/a>.<\/li>\n<li><strong>He, J, Wang, Y, Missinato, MA, Onuoha, E, Perkins, LA, Watkins, SC, St Croix, CM, Tsang, M, Bruchez, MP<\/strong>. A genetically targetable near-infrared photosensitizer. Nat Methods. 2016; 13 (3):263-8. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/26808669\" target=\"_blank\" rel=\"noopener\">PMID:26808669<\/a>.<\/li>\n<\/ul>\n<h3>2015<\/h3>\n<ul>\n<li><strong>Zhang, M, Chakraborty, SK, Sampath, P, Rojas, JJ, Hou, W, Saurabh, S, Thorne, SH, Bruchez, MP, Waggoner, AS<\/strong>. Fluoromodule-based reporter\/probes designed for in vivo fluorescence imaging. J Clin Invest. 2015; 125 (10):3915-27. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/26348895\" target=\"_blank\" rel=\"noopener\">PMID:26348895<\/a>.<\/li>\n<li><strong>Saurabh, S, Zhang, M, Mann, VR, Costello, AM, Bruchez, MP<\/strong>. Kinetically Tunable Photostability of Fluorogen-Activating Peptide-Fluorogen Complexes. Chemphyschem. 2015; 16 (14):2974-80. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/26310607\" target=\"_blank\" rel=\"noopener\">PMID:26310607<\/a>.<\/li>\n<li><strong>Pratt, CP, He, J, Wang, Y, Barth, AL, Bruchez, MP<\/strong>. Fluorogenic Green-Inside Red-Outside (GIRO) Labeling Approach Reveals Adenylyl Cyclase-Dependent Control of BK\u03b1 Surface Expression. Bioconjug Chem. 2015; 26 (9):1963-71. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/26301573\" target=\"_blank\" rel=\"noopener\">PMID:26301573<\/a>.<\/li>\n<li><strong>Canady, TD, Telmer, CA, Oyaghire, SN, Armitage, BA, Bruchez, MP<\/strong>. In Vitro Reversible Translation Control Using \u03b3PNA Probes. J Am Chem Soc. 2015; 137 (32):10268-75. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/26241615\" target=\"_blank\" rel=\"noopener\">PMID:26241615<\/a>.<\/li>\n<li><strong>Magenau, AJ, Saurabh, S, Andreko, SK, Telmer, CA, Schmidt, BF, Waggoner, AS, Bruchez, MP<\/strong>. Genetically targeted fluorogenic macromolecules for subcellular imaging and cellular perturbation. Biomaterials. 2015; 66 :1-8. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/26183934\" target=\"_blank\" rel=\"noopener\">PMID:26183934<\/a>.<\/li>\n<li><strong>Bruchez, MP<\/strong>. Dark dyes-bright complexes: fluorogenic protein labeling. Curr Opin Chem Biol. 2015; 27 :18-23. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/26056741\" target=\"_blank\" rel=\"noopener\">PMID:26056741<\/a>.<\/li>\n<li><strong>Yan, Q, Bruchez, MP<\/strong>. Advances in chemical labeling of proteins in living cells. Cell Tissue Res. 2015; 360 (1):179-94. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/25743694\" target=\"_blank\" rel=\"noopener\">PMID:25743694<\/a>.<\/li>\n<li><strong>Telmer, CA, Verma, R, Teng, H, Andreko, S, Law, L, Bruchez, MP<\/strong>. Rapid, specific, no-wash, far-red fluorogen activation in subcellular compartments by targeted fluorogen activating proteins. ACS Chem Biol. 2015; 10 (5):1239-46. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/25650487\" target=\"_blank\" rel=\"noopener\">PMID:25650487<\/a>.<\/li>\n<li><strong>Yan, Q, Schmidt, BF, Perkins, LA, Naganbabu, M, Saurabh, S, Andreko, SK, Bruchez, MP<\/strong>. Near-instant surface-selective fluorogenic protein quantification using sulfonated triarylmethane dyes and fluorogen activating proteins. Org Biomol Chem. 2015; 13 (7):2078-86. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/25520058\" target=\"_blank\" rel=\"noopener\">PMID:25520058<\/a>.<\/li>\n<li><strong>Wang, Y, Telmer, CA, Schmidt, BF, Franke, JD, Ort, S, Arndt-Jovin, DJ, Bruchez, MP<\/strong>. Fluorogen activating protein-affibody probes: modular, no-wash measurement of epidermal growth factor receptors. Bioconjug Chem. 2015; 26 (1):137-44. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/25490520\" target=\"_blank\" rel=\"noopener\">PMID:25490520<\/a>.<\/li>\n<li><strong>Ganesan, V, Schmidt, B, Avula, R, Cooke, D, Maggiacomo, T, Tellin, L, Ascherman, DP, Bruchez, MP, Minden, J.<\/strong> Immuno-proteomics: Development of a novel reagent for separating antibodies from their target proteins. Biochim Biophys Acta. 2015; 1854 (6):592-600. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/25466873\" target=\"_blank\" rel=\"noopener\">PMID:25466873<\/a>.<\/li>\n<li><strong>Schwartz, SL, Yan, Q, Telmer, CA, Lidke, KA, Bruchez, MP, Lidke, DS<\/strong>. Fluorogen-activating proteins provide tunable labeling densities for tracking Fc\u03b5RI independent of IgE. ACS Chem Biol. 2015; 10 (2):539-46. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/25343439\" target=\"_blank\" rel=\"noopener\">PMID:25343439<\/a>.<\/li>\n<\/ul>\n<h3>2014<\/h3>\n<ul>\n<li><strong>Saurabh, S, Beck, LE, Maji, S, Baty, CJ, Wang, Y, Yan, Q, Watkins, SC, Bruchez, MP<\/strong>. Multiplexed modular genetic targeting of quantum dots. ACS Nano. 2014; 8 (11):11138-46. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/25380615\" target=\"_blank\" rel=\"noopener\">PMID:25380615<\/a>.<\/li>\n<li><strong>Tan, X, Wang, Y, Armitage, BA, Bruchez, MP<\/strong>. Label-free molecular beacons for biomolecular detection. Anal Chem. 2014; 86 (21):10864-9. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/25287123\" target=\"_blank\" rel=\"noopener\">PMID:25287123<\/a>.<\/li>\n<li><strong>Saunders, MJ, Block, E, Sorkin, A, Waggoner, AS, Bruchez, MP<\/strong>. A bifunctional converter: fluorescein quenching scFv\/fluorogen activating protein for photostability and improved signal to noise in fluorescence experiments. Bioconjug Chem. 2014; 25 (8):1556-64. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/25072845\" target=\"_blank\" rel=\"noopener\">PMID:25072845<\/a>.<\/li>\n<li><strong>Tan, C, Saurabh, S, Bruchez, MP, Schwartz, R, LeDuc, P<\/strong>. Reply to \u2018Complexity of molecular crowding in cell-free enzymatic reaction networks\u2019. Nat Nanotechnol. 2014; 9 (6):407-8. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/24894472\" target=\"_blank\" rel=\"noopener\">PMID:24894472<\/a>.<\/li>\n<li><strong>Tan, X, Dey, SK, Telmer, C, Zhang, X, Armitage, BA, Bruchez, MP<\/strong>. Aptamers act as activators for the thrombin mediated-hydrolysis of peptide substrates. Chembiochem. 2014; 15 (2):205-8. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/24339381\" target=\"_blank\" rel=\"noopener\">PMID:24339381<\/a>.<\/li>\n<li><strong>Lan, L, Nakajima, S, Wei, L, Sun, L, Hsieh, CL, Sobol, RW, Bruchez, M, Van Houten, B, Yasui, A, Levine, AS<\/strong>. Novel method for site-specific induction of oxidative DNA damage reveals differences in recruitment of repair proteins to heterochromatin and euchromatin. Nucleic Acids Res. 2014; 42 (4):2330-45. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/24293652\" target=\"_blank\" rel=\"noopener\">PMID:24293652<\/a>.<\/li>\n<li><strong>Yan, Q, Schwartz, SL, Maji, S, Huang, F, Szent-Gyorgyi, C, Lidke, DS, Lidke, KA, Bruchez, MP<\/strong>. Localization microscopy using noncovalent fluorogen activation by genetically encoded fluorogen-activating proteins. Chemphyschem. 2014; 15 (4):687-695. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/24194371\" target=\"_blank\" rel=\"noopener\">PMID:24194371<\/a>.<\/li>\n<\/ul>\n<h3>2013<\/h3>\n<ul>\n<li><strong>Szent-Gyorgyi, C, Stanfield, RL, Andreko, S, Dempsey, A, Ahmed, M, Capek, S, Waggoner, AS, Wilson, IA, Bruchez, MP<\/strong>. Malachite green mediates homodimerization of antibody VL domains to form a fluorescent ternary complex with singular symmetric interfaces. J Mol Biol. 2013; 425 (22):4595-613. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/23978698\" target=\"_blank\" rel=\"noopener\">PMID:23978698<\/a>.<\/li>\n<li><strong>Xu, J, Chang, J, Yan, Q, Dertinger, T, Bruchez, M, Weiss, S<\/strong>. Labeling Cytosolic Targets in Live Cells with Blinking Probes. J Phys Chem Lett. 2013; 4 (13):2138-2146. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/23930154\" target=\"_blank\" rel=\"noopener\">PMID:23930154<\/a>.<\/li>\n<li><strong>Tan, C, Saurabh, S, Bruchez, MP, Schwartz, R, Leduc, P<\/strong>. Molecular crowding shapes gene expression in synthetic cellular nanosystems. Nat Nanotechnol. 2013; 8 (8):602-8. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/23851358\" target=\"_blank\" rel=\"noopener\">PMID:23851358<\/a>.<\/li>\n<\/ul>\n<h3>2012<\/h3>\n<ul>\n<li><strong>Ballou, B, Andreko, SK, Osuna-Highley, E, McRaven, M, Catalone, T, Bruchez, MP, Hope, TJ, Labib, ME<\/strong>. Nanoparticle transport from mouse vagina to adjacent lymph nodes. PLoS One. 2012; 7 (12):e51995. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/23284844\" target=\"_blank\" rel=\"noopener\">PMID:23284844<\/a>.<\/li>\n<li><strong>Yushchenko, DA, Zhang, M, Yan, Q, Waggoner, AS, Bruchez, MP<\/strong>. Genetically targetable and color-switching fluorescent probe. Chembiochem. 2012; 13 (11):1564-8. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/22777954\" target=\"_blank\" rel=\"noopener\">PMID:22777954<\/a>.<\/li>\n<li><strong>Maji, S, Bruchez, MP<\/strong>. Inferring biological structures from super-resolution single molecule images using generative models. PLoS One. 2012; 7 (5):e36973. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/22629348\" target=\"_blank\" rel=\"noopener\">PMID:22629348<\/a>.<\/li>\n<li><strong>Grover, A, Schmidt, BF, Salter, RD, Watkins, SC, Waggoner, AS, Bruchez, MP<\/strong>. Genetically encoded pH sensor for tracking surface proteins through endocytosis. Angew Chem Int Ed Engl. 2012; 51 (20):4838-42. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/22461279\" target=\"_blank\" rel=\"noopener\">PMID:22461279<\/a>.<\/li>\n<li><strong>Saurabh, S, Maji, S, Bruchez, MP<\/strong>. Evaluation of sCMOS cameras for detection and localization of single Cy5 molecules. Opt Express. 2012; 20 (7):7338-49. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/22453414\" target=\"_blank\" rel=\"noopener\">PMID:22453414<\/a>.<\/li>\n<li><strong>Shruti, S, Urban-Ciecko, J, Fitzpatrick, JA, Brenner, R, Bruchez, MP, Barth, AL<\/strong>. The brain-specific Beta4 subunit downregulates BK channel cell surface expression. PLoS One. 2012; 7 (3):e33429. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/22438928\" target=\"_blank\" rel=\"noopener\">PMID:22438928<\/a>.<\/li>\n<li><strong>Saunders, MJ, Szent-Gyorgyi, C, Fisher, GW, Jarvik, JW, Bruchez, MP, Waggoner, AS<\/strong>. Fluorogen activating proteins in flow cytometry for the study of surface molecules and receptors. Methods. 2012; 57 (3):308-17. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/22366230\" target=\"_blank\" rel=\"noopener\">PMID:22366230<\/a>.<\/li>\n<li><strong>Micheva, KD, Bruchez, MP<\/strong>. The gain in brain: novel imaging techniques and multiplexed proteomic imaging of brain tissue ultrastructure. Curr Opin Neurobiol. 2012; 22 (1):94-100. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/21944260\" target=\"_blank\" rel=\"noopener\">PMID:21944260<\/a>.<\/li>\n<\/ul>\n<h3>2011<\/h3>\n<ul>\n<li><strong>Bruchez, MP<\/strong>. Quantum dots find their stride in single molecule tracking. Curr Opin Chem Biol. 2011; 15 (6):775-80. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/22055494\" target=\"_blank\" rel=\"noopener\">PMID:22055494<\/a>.<\/li>\n<li><strong>Mittal, R, Bruchez, MP<\/strong>. Biotin-4-fluorescein based fluorescence quenching assay for determination of biotin binding capacity of streptavidin conjugated quantum dots. Bioconjug Chem. 2011; 22 (3):362-8. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/21314110\" target=\"_blank\" rel=\"noopener\">PMID:21314110<\/a>.<\/li>\n<\/ul>\n<h3>2010<\/h3>\n<ul>\n<li><strong>Bruchez, M<\/strong>. [From loss of autonomy to dysautonomia: anticholinergic drugs in geriatrics]. Rev Med Suisse. 2010; 6 (270):2146-9. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/21174838\" target=\"_blank\" rel=\"noopener\">PMID:21174838<\/a>.<\/li>\n<li><strong>Szent-Gyorgyi, C, Schmidt, BF, Fitzpatrick, JA, Bruchez, MP<\/strong>. Fluorogenic dendrons with multiple donor chromophores as bright genetically targeted and activated probes. J Am Chem Soc. 2010; 132 (32):11103-9. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/20698676\" target=\"_blank\" rel=\"noopener\">PMID:20698676<\/a>.<\/li>\n<li><strong>Fisher, GW, Adler, SA, Fuhrman, MH, Waggoner, AS, Bruchez, MP, Jarvik, JW<\/strong>. Detection and quantification of beta2AR internalization in living cells using FAP-based biosensor technology. J Biomol Screen. 2010; 15 (6):703-9. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/20488980\" target=\"_blank\" rel=\"noopener\">PMID:20488980<\/a>.<\/li>\n<\/ul>\n<h3>2009<\/h3>\n<ul>\n<li><strong>Ballou, B, Ernst, LA, Andreko, S, Fitzpatrick, JA, Lagerholm, BC, Waggoner, AS, Bruchez, MP<\/strong>. Imaging vasculature and lymphatic flow in mice using quantum dots. Methods Mol Biol. 2009; 574 :63-74. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/19685300\" target=\"_blank\" rel=\"noopener\">PMID:19685300<\/a>.<\/li>\n<li><strong>Mittal, R, Bruchez, MP<\/strong>. Calibration of Flow Cytometry for Quantitative Quantum Dot Measurements. Curr Protoc Cytom. 2009; Chapter 6 :Unit6.26. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/20953266\" target=\"_blank\" rel=\"noopener\">PMID:20953266<\/a>.<\/li>\n<li><strong>Fitzpatrick, JA, Andreko, SK, Ernst, LA, Waggoner, AS, Ballou, B, Bruchez, MP<\/strong>. Long-term persistence and spectral blue shifting of quantum dots in vivo. Nano Lett. 2009; 9 (7):2736-41. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/19518087\" target=\"_blank\" rel=\"noopener\">PMID:19518087<\/a>.<\/li>\n<li><strong>Fitzpatrick, JA, Yan, Q, Sieber, JJ, Dyba, M, Schwarz, U, Szent-Gyorgyi, C, Woolford, CA, Berget, PB, Waggoner, AS, Bruchez, MP<\/strong>. STED nanoscopy in living cells using Fluorogen Activating Proteins. Bioconjug Chem. 2009; 20 (10):1843-1847. <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/20976031\" target=\"_blank\" rel=\"noopener\">PubMed PMID:20976031<\/a>.<\/li>\n<\/ul>\n<h3>2008<\/h3>\n<ul>\n<li><strong>Daneshvar, H, Nelms, J, Muhammad, O, Jackson, H, Tkach, J, Davros, W, Peterson, T, Vogelbaum, MA, Bruchez, MP, Toms, SA<\/strong>. Imaging characteristics of zinc sulfide shell, cadmium telluride core quantum dots. Nanomedicine (Lond). 2008; 3 (1):21-9. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/18393664\" target=\"_blank\" rel=\"noopener\">PMID:18393664<\/a>.<\/li>\n<li><strong>Szent-Gyorgyi, C, Schmidt, BF, Creeger, Y, Fisher, GW, Zakel, KL, Adler, S, Fitzpatrick, JA, Woolford, CA, Yan, Q, Vasilev, KV, Berget, PB, Bruchez, MP, Jarvik, JW, Waggoner, A<\/strong>. Fluorogen-activating single-chain antibodies for imaging cell surface proteins. Nat Biotechnol. 2008; 26 (2):235-40. PubMed <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/18157118\" target=\"_blank\" rel=\"noopener\">PMID:18157118<\/a>.<\/li>\n<\/ul><\/div>\n\t\t\t<\/div>\n\t\t\t<\/div>\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t<\/div>\n\t\t\t\t\n\t\t\t\t\n\t\t\t<\/div><\/p>\n","protected":false},"excerpt":{"rendered":"","protected":false},"author":10,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_et_pb_use_builder":"on","_et_pb_old_content":"","_et_gb_content_width":"","footnotes":""},"class_list":["post-99","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/labs.bio.cmu.edu\/bruchez-lab\/wp-json\/wp\/v2\/pages\/99","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/labs.bio.cmu.edu\/bruchez-lab\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/labs.bio.cmu.edu\/bruchez-lab\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/labs.bio.cmu.edu\/bruchez-lab\/wp-json\/wp\/v2\/users\/10"}],"replies":[{"embeddable":true,"href":"https:\/\/labs.bio.cmu.edu\/bruchez-lab\/wp-json\/wp\/v2\/comments?post=99"}],"version-history":[{"count":13,"href":"https:\/\/labs.bio.cmu.edu\/bruchez-lab\/wp-json\/wp\/v2\/pages\/99\/revisions"}],"predecessor-version":[{"id":187,"href":"https:\/\/labs.bio.cmu.edu\/bruchez-lab\/wp-json\/wp\/v2\/pages\/99\/revisions\/187"}],"wp:attachment":[{"href":"https:\/\/labs.bio.cmu.edu\/bruchez-lab\/wp-json\/wp\/v2\/media?parent=99"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}