{"id":329,"date":"2019-07-17T19:01:58","date_gmt":"2019-07-17T19:01:58","guid":{"rendered":"https:\/\/labs.bio.cmu.edu\/mcmanus\/?page_id=329"},"modified":"2025-05-26T18:10:13","modified_gmt":"2025-05-26T18:10:13","slug":"rna-structure-mapping","status":"publish","type":"page","link":"https:\/\/labs.bio.cmu.edu\/mcmanus\/research\/rna-structure-mapping\/","title":{"rendered":"Translation Regulation in Fungal Pathogens"},"content":{"rendered":"<p><div class=\"et_pb_with_border et_d4_element et_pb_section et_pb_section_0 et_pb_with_background  et_pb_css_mix_blend_mode et_section_regular et_block_section\" >\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t<div class=\"et_d4_element et_pb_row et_pb_row_0  et_pb_css_mix_blend_mode et_block_row\">\n\t\t\t\t<div class=\"et_d4_element et_pb_column_4_4 et_pb_column et_pb_column_0  et_pb_css_mix_blend_mode et-last-child et_block_column\">\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t<div class=\"et_pb_module et_d4_element et_pb_image et_pb_image_0\">\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t<span class=\"et_pb_image_wrap \"><img loading=\"lazy\" decoding=\"async\" width=\"1779\" height=\"408\" src=\"https:\/\/labs.bio.cmu.edu\/mcmanus\/wp-content\/uploads\/sites\/2\/2025\/03\/cropped-logo5.gif\" alt=\"\" title=\"cropped-logo5.gif\" class=\"wp-image-462\" \/><\/span>\n\t\t\t<\/div>\n\t\t\t<\/div>\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t<\/div>\n\t\t\t\t\n\t\t\t\t\n\t\t\t<\/div><div class=\"et_d4_element et_pb_section et_pb_section_1  et_pb_css_mix_blend_mode et_section_regular et_block_section\" >\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t<div class=\"et_d4_element et_pb_row et_pb_row_1  et_pb_css_mix_blend_mode et_block_row\">\n\t\t\t\t<div class=\"et_d4_element et_pb_column_4_4 et_pb_column et_pb_column_1  et_pb_css_mix_blend_mode et-last-child et_block_column\">\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t<div class=\"et_pb_module et_d4_element et_pb_text et_pb_text_0  et_pb_text_align_left et_pb_bg_layout_light\">\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t<div class=\"et_pb_text_inner\"><h1>Translation Regulation in Fungal Pathogens<\/h1><\/div>\n\t\t\t<\/div>\n\t\t\t<\/div>\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t<\/div><div class=\"et_d4_element et_pb_row et_pb_row_2  et_pb_css_mix_blend_mode et_block_row\">\n\t\t\t\t<div class=\"et_d4_element et_pb_column_2_5 et_pb_column et_pb_column_2  et_pb_css_mix_blend_mode et_block_column\">\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t<div class=\"et_pb_module et_d4_element et_pb_image et_pb_image_1\">\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t<span class=\"et_pb_image_wrap \"><img loading=\"lazy\" decoding=\"async\" width=\"897\" height=\"990\" src=\"https:\/\/labs.bio.cmu.edu\/mcmanus\/wp-content\/uploads\/sites\/2\/2025\/03\/candida.gif\" alt=\"\" title=\"candida\" class=\"wp-image-469\" \/><\/span>\n\t\t\t<\/div>\n\t\t\t<\/div><div class=\"et_d4_element et_pb_column_3_5 et_pb_column et_pb_column_3  et_pb_css_mix_blend_mode et-last-child et_block_column\">\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t<div class=\"et_pb_module et_d4_element et_pb_text et_pb_text_1  et_pb_text_align_left et_pb_bg_layout_light\">\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t<div class=\"et_pb_text_inner\"><em>Candida albicans<\/em> is an opportunistic infectious yeast. Pathogenicity requires detecting and responding to stress in divergent physiological microenvironments. Under stress, <em>C. albicans<\/em> undergoes the process of filamentation, shifting from commensal yeast to virulent hyphae. In addition, <em>C albicans<\/em> can also form biofilms. Under different hyphal-inducing conditions <em>C. albicans<\/em> activates distinct transcriptional programs. While transcriptional control of hyphal growth has been extensively studied, comparatively little is known about post-transcriptional regulation of this significant morphological shift. We use CRISPR-Cas9, mRNA seq, and ribosome profiling to examine the role that post-transcriptional translation regulation and P-body formation plays in the yeast to hyphae transition. Recently we have found that in lab and clinical strains of <em>C. albicans<\/em>, mRNA decay factors play distinct roles in regulating cell morphology and that Dhh1 contributes to environmentally appropriate expression of the stress response and hyphal growth. Our work supports distinct requirements for specific mRNA decay factors, bolstering evidence for post-transcriptional regulation of filamentation in <em>C. albicans<\/em>. We are also applying these methods to study translation regulation in another pathogenic fungus, <em>Cryptococcus neoformans<\/em>.<\/div>\n\t\t\t<\/div><div class=\"et_pb_with_border et_pb_module et_d4_element et_pb_text et_pb_text_2  et_pb_text_align_left et_pb_bg_layout_light\">\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t<div class=\"et_pb_text_inner\"><p><em>Photographs by Melissa Tosiano<\/em><\/p><\/div>\n\t\t\t<\/div>\n\t\t\t<\/div>\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t<\/div>\n\t\t\t\t\n\t\t\t\t\n\t\t\t<\/div><div class=\"et_d4_element et_pb_section et_pb_section_2  et_pb_css_mix_blend_mode et_section_regular et_block_section\" >\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t<div class=\"et_d4_element et_pb_row et_pb_row_3  et_pb_css_mix_blend_mode et_block_row\">\n\t\t\t\t<div class=\"et_d4_element et_pb_column_4_4 et_pb_column et_pb_column_4  et_pb_css_mix_blend_mode et-last-child et_block_column\">\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t<div class=\"et_pb_module et_d4_element et_pb_text et_pb_text_3  et_pb_text_align_left et_pb_bg_layout_light\">\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t<div class=\"et_pb_text_inner\"><h3>Selected Publications<\/h3><\/div>\n\t\t\t<\/div><div class=\"et_pb_module et_d4_element et_pb_text et_pb_text_4  et_pb_text_align_left et_pb_bg_layout_light\">\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t<div class=\"et_pb_text_inner\"><p>Tosiano MA, Lanni F, Mitchell AP, McManus CJ. (2025) Roles of P-body factors in Candida albicans filamentation and stress response. <a href=\"https:\/\/journals.plos.org\/plosgenetics\/article?id=10.1371\/journal.pgen.1011632\" target=\"_blank\" rel=\"noopener\"><em>PLOS Genetics<\/em><\/a><\/p>\n<p>Cravener MV, Do E, May G, Zarnowski R, Andes DR, <strong>McManus CJ<\/strong>, Mitchell AP. (2023) Reinforcement amid genetic diversity in the Candida albicans biofilm regulatory network. <em><a href=\"https:\/\/journals.plos.org\/plospathogens\/article?id=10.1371\/journal.ppat.1011109\" target=\"_blank\" rel=\"noopener\">PLoS Pathogens<\/a><\/em><\/p>\n<p>Do E, Cravener MV, Huang MY, May G, <strong>McManus CJ<\/strong>, Mitchell AP. (2022) Collaboration between Antagonistic Cell Type Regulators Governs Natural Variation in the <em>Candida albicans<\/em> Biofilm and Hyphal Gene Expression Network. <a href=\"https:\/\/journals.asm.org\/doi\/full\/10.1128\/mbio.01937-22?rfr_dat=cr_pub++0pubmed&amp;url_ver=Z39.88-2003&amp;rfr_id=ori%3Arid%3Acrossref.org\" target=\"_blank\" rel=\"noopener\"><em>mBio<\/em><\/a><\/p>\n<p>Lagree K, Woolford CA, Huang MY, May G, <strong>McManus CJ<\/strong>, Solis NV, Filler SG, Mitchell AP. (2020) Roles of <em>Candida albicans<\/em> Mig1 and Mig2 in glucose repression, pathogenicity traits, and SNF1 essentiality. <em><a href=\"https:\/\/journals.plos.org\/plosgenetics\/article?id=10.1371\/journal.pgen.1008582\" target=\"_blank\" rel=\"noopener\">PLoS Genetics<\/a><\/em><\/p>\n<p>Huang MY, Woolford CA, May G, McManus CJ, Mitchell AP. (2019) Circuit diversification in a biofilm regulatory network. <a href=\"https:\/\/journals.plos.org\/plospathogens\/article?id=10.1371\/journal.ppat.1007787\" target=\"_blank\" rel=\"noopener\"><em>PLoS Pathogens<\/em><\/a><\/p><\/div>\n\t\t\t<\/div>\n\t\t\t<\/div>\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t\t\n\t\t\t<\/div>\n\t\t\t\t\n\t\t\t\t\n\t\t\t<\/div><\/p>\n","protected":false},"excerpt":{"rendered":"","protected":false},"author":21,"featured_media":0,"parent":8,"menu_order":2,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_et_pb_use_builder":"on","_et_pb_old_content":"[caption id=\"attachment_469\" align=\"alignleft\" width=\"272\"]<img class=\"wp-image-469 size-medium\" src=\"https:\/\/labs.bio.cmu.edu\/mcmanus\/wp-content\/uploads\/sites\/2\/2025\/03\/candida-272x300.gif\" alt=\"\" width=\"272\" height=\"300\" \/> Photographs by Melissa Tosiano[\/caption]\r\n\r\n<em>Candia albicans<\/em> is an opportunistic infectious yeast. Pathogenicity requires detecting and responding to stress in divergent physiological microenvironments. Under stress, <em>C. albicans<\/em> undergoes the process of filamentation, shifting from commensal yeast to virulent hyphae. In addition, <em>C albicans<\/em> can also form biofilms. Under different hyphal-inducing conditions <em>C. albicans<\/em> activates distinct transcriptional programs. While transcriptional control of hyphal growth has been extensively studied, comparatively little is known about post-transcriptional regulation of this significant morphological shift. We use CRISPR-Cas9, mRNA seq, and ribosome profiling to examine the role that post-transcriptional translation regulation and P-body formation plays in the yeast to hyphae transition. Recently we have found that in lab and clinical strains of <em>C. albicans<\/em>, mRNA decay factors play distinct roles in regulating cell morphology and that Dhh1 contributes to environmentally appropriate expression of the stress response and hyphal growth. Our work supports distinct requirements for specific mRNA decay factors, bolstering evidence for post-transcriptional regulation of filamentation in <em>C. albicans<\/em>. We are also applying these methods to study translation regulation in another pathogenic fungus, <em>Cryptococcus neoformans<\/em>.\r\n\r\n&nbsp;\r\n<h3>Selected Publications<\/h3>\r\nTosiano MA, Lanni F, Mitchell AP, McManus CJ. (2025) Roles of P-body factors in Candida albicans filamentation and stress response. <a href=\"https:\/\/www.biorxiv.org\/content\/10.1101\/2024.07.09.602714v2.abstract\"><em>Accepted to PLOS Genetics<\/em><\/a>\r\n\r\nCravener MV, Do E, May G, Zarnowski R, Andes DR, <strong>McManus CJ<\/strong>, Mitchell AP. (2023) Reinforcement amid genetic diversity in the Candida albicans biofilm regulatory network. <em><a href=\"https:\/\/journals.plos.org\/plospathogens\/article?id=10.1371\/journal.ppat.1011109\">PLoS Pathogens<\/a><\/em>\r\n\r\nDo E, Cravener MV, Huang MY, May G, <strong>McManus CJ<\/strong>, Mitchell AP. (2022) Collaboration between Antagonistic Cell Type Regulators Governs Natural Variation in the <em>Candida albicans<\/em> Biofilm and Hyphal Gene Expression Network. <a href=\"https:\/\/journals.asm.org\/doi\/full\/10.1128\/mbio.01937-22?rfr_dat=cr_pub++0pubmed&amp;url_ver=Z39.88-2003&amp;rfr_id=ori%3Arid%3Acrossref.org\"><em>mBio<\/em><\/a>\r\n\r\nLagree K, Woolford CA, Huang MY, May G, <strong>McManus CJ<\/strong>, Solis NV, Filler SG, Mitchell AP. (2020) Roles of <em>Candida albicans<\/em> Mig1 and Mig2 in glucose repression, pathogenicity traits, and SNF1 essentiality. <em><a href=\"https:\/\/journals.plos.org\/plosgenetics\/article?id=10.1371\/journal.pgen.1008582\">PLoS Genetics<\/a><\/em>\r\n\r\nHuang MY, Woolford CA, May G, McManus CJ, Mitchell AP. (2019) Circuit diversification in a biofilm regulatory network. <a href=\"https:\/\/journals.plos.org\/plospathogens\/article?id=10.1371\/journal.ppat.1007787\"><em>PLoS Pathogens<\/em><\/a>\r\n\r\n&nbsp;\r\n\r\n&nbsp;","_et_gb_content_width":"","footnotes":""},"class_list":["post-329","page","type-page","status-publish","hentry"],"jetpack_sharing_enabled":true,"jetpack_shortlink":"https:\/\/wp.me\/ParKnc-5j","_links":{"self":[{"href":"https:\/\/labs.bio.cmu.edu\/mcmanus\/wp-json\/wp\/v2\/pages\/329","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/labs.bio.cmu.edu\/mcmanus\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/labs.bio.cmu.edu\/mcmanus\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/labs.bio.cmu.edu\/mcmanus\/wp-json\/wp\/v2\/users\/21"}],"replies":[{"embeddable":true,"href":"https:\/\/labs.bio.cmu.edu\/mcmanus\/wp-json\/wp\/v2\/comments?post=329"}],"version-history":[{"count":19,"href":"https:\/\/labs.bio.cmu.edu\/mcmanus\/wp-json\/wp\/v2\/pages\/329\/revisions"}],"predecessor-version":[{"id":711,"href":"https:\/\/labs.bio.cmu.edu\/mcmanus\/wp-json\/wp\/v2\/pages\/329\/revisions\/711"}],"up":[{"embeddable":true,"href":"https:\/\/labs.bio.cmu.edu\/mcmanus\/wp-json\/wp\/v2\/pages\/8"}],"wp:attachment":[{"href":"https:\/\/labs.bio.cmu.edu\/mcmanus\/wp-json\/wp\/v2\/media?parent=329"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}